PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.R44YW
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 245aa    MW: 27563.8 Da    PI: 6.8292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.R44YWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-08140187455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+++Er RR +iN+++  L+ ++P +     k +  a +L + ++Y++sLq
  Araip.R44YW 140 SHSIAERVRRGKINEKLRCLQNIVPGC----YKTMGMAVMLDEIINYVQSLQ 187
                  8*************************9....35599999**********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.82E-9134191No hitNo description
SuperFamilySSF474591.24E-15134202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.71136186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-15136195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-5140187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-7142192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MIMKPFLDID PSMDLINQFI GLNTTTTTTT THMNMCDNLF GSHHHHHHHQ DDFQGNLEES  60
FHQNHHHVNN NASSVVVPVI SSSLLNYYPS ENEEVHEGKK RKATTSGNST PAASHHSESK  120
IIKNNEVVHV RARRGQATDS HSIAERVRRG KINEKLRCLQ NIVPGCYKTM GMAVMLDEII  180
NYVQSLQHQV EFLSLKLTAA STFYDFNSET DALETMQASE AKELGKYGKE GHGGVSCYQP  240
NWPLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312561e-111KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016200908.11e-146PREDICTED: transcription factor BEE 1-like
TrEMBLA0A0L9VHC51e-107A0A0L9VHC5_PHAAN; Uncharacterized protein
TrEMBLA0A0S3TD351e-107A0A0S3TD35_PHAAN; Uncharacterized protein
STRINGGLYMA09G31580.21e-101(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.15e-60BR enhanced expression 1